CDS

Accession Number TCMCG016C10494
gbkey CDS
Protein Id OMO83745.1
Location join(44271..44283,44916..46297)
Organism Corchorus capsularis
locus_tag CCACVL1_11231

Protein

Length 464aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01009838.1
Definition hypothetical protein CCACVL1_11231 [Corchorus capsularis]
Locus_tag CCACVL1_11231

EGGNOG-MAPPER Annotation

COG_category A
Description cleavage and polyadenylation specificity factor subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14398        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03015        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
GOs GO:0000228        [VIEW IN EMBL-EBI]
GO:0000381        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0000790        [VIEW IN EMBL-EBI]
GO:0000791        [VIEW IN EMBL-EBI]
GO:0000976        [VIEW IN EMBL-EBI]
GO:0000977        [VIEW IN EMBL-EBI]
GO:0000978        [VIEW IN EMBL-EBI]
GO:0000987        [VIEW IN EMBL-EBI]
GO:0001012        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005615        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005719        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006509        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033119        [VIEW IN EMBL-EBI]
GO:0033120        [VIEW IN EMBL-EBI]
GO:0033619        [VIEW IN EMBL-EBI]
GO:0034097        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043230        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043484        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044421        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044530        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0045944        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048024        [VIEW IN EMBL-EBI]
GO:0048025        [VIEW IN EMBL-EBI]
GO:0048026        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050684        [VIEW IN EMBL-EBI]
GO:0050685        [VIEW IN EMBL-EBI]
GO:0050686        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051259        [VIEW IN EMBL-EBI]
GO:0051260        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070062        [VIEW IN EMBL-EBI]
GO:0070555        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071013        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071345        [VIEW IN EMBL-EBI]
GO:0071347        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1903312        [VIEW IN EMBL-EBI]
GO:1903313        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1903561        [VIEW IN EMBL-EBI]
GO:1990837        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGGTGAAGGATGCTGAACTGGAGTCGGAATTGTGCAAGTATGGGCCTGTGAAGGAAGTTAAGTTTTTTGATGAGAAAGCAAGTGGGAAGTCAAAAGGATATTGCCAGGTTGAGTTTTATGATCCAGCTGCTGCCGCAGCTTGTAAGGAAGGAATGAATGGGCATGCGTTTAATGGAAGGCCATGTGTTGTTGCCTTTGCATCGCCATTTACTGTTAAGAAAATGGGAGAGGCTCAGTTAAATAGGAATCAACAGATGGCACAAGCTGCCGTTCCCCAAACTAAGAGGGGCCCTAATGATGCCGCAGGTAAGACCGGTGCCAATAACATTCAAACTGGCGGGAATTATCAAGGTGGGGATAATAGGGGTTATGGGAGAGGGAATTGGGGAAGAGGTAATGCACAGGGGATGGGAAATAGAGGGCCTGTTGGTCCTATGAGAAATAGGGCTGGTGGAATGGGTGGTAGAGGTATCATGGGGAATGGTGGAAATGGATTTGGACAGGGCATTGGTGCAACTCCCCCTCTCATGCACCCGCAGTCTATGATGGGCCAAGGTTTTGATCCAGCTTTTGGGGGACCCATGGGAAGAATGGGCAGTTATGGAGGCTTTCCTGGTGCTCCAACACCCCCATTTTCGGGGATATTATCTTCCTTCCCTCCTGTTGGAGGAGTTGGTTTGCCTGCAGTGGCTCCTCATGTTAACCCTGCATTTTTTGGAAGAGGTATGCCGCCTATGAATGGTATGGGGATGATGCCAACAGGTGGTGTAGATGGGCCTAATATGGGAATGTGGTCAGATCCTAGTATGGGCGGATGGGGTGGTGAAGAGCATGGTGGTGGGAGAGCTGGAGAGTCTAGTTATGGTGAGGAAGCTGCATCTGACCATCAATATGGTGAGGTTAGCCATGATAGAGGAGGCTGGCAAAATCCCATGAAAGAAAAAGATAGAGCTTCAGAAAGGGACTGGTCTGGTTCATCTGAAAGAAGATACCGTGATGAAAGAGAACCAGGGTATGAAAGGGATATGCCTAGAGAGAAGGACGTGGGTCCTGATCATGATTGGCCTGAAAGAAGGCACCGGGATGATAGAGACATTGGTCGGGAACGTGAAAGGGAGAGAGATAGGGAAAGGGAGCGTTCTCGAGATCGGGACCGTGATCGTGATAGGGAACGTGATCGGGACAGGGATAGGGACCGGTATAGGGAAGAAAGAGACAGGTATGCGGATCATCATAGGTACAGAGATCGTGAACCAGAGCATGATGAAGAGTGGGACCGGGGACGGTCATCAAGGACTCACAGTAAGTCACGATTGTCACAAGATGAGGAGCATCGCTCGAGATCTAGAGATGCTGATTATGGGAAGAGGCGGCGGCTTACCTCTGAGTGA
Protein:  
MSVKDAELESELCKYGPVKEVKFFDEKASGKSKGYCQVEFYDPAAAAACKEGMNGHAFNGRPCVVAFASPFTVKKMGEAQLNRNQQMAQAAVPQTKRGPNDAAGKTGANNIQTGGNYQGGDNRGYGRGNWGRGNAQGMGNRGPVGPMRNRAGGMGGRGIMGNGGNGFGQGIGATPPLMHPQSMMGQGFDPAFGGPMGRMGSYGGFPGAPTPPFSGILSSFPPVGGVGLPAVAPHVNPAFFGRGMPPMNGMGMMPTGGVDGPNMGMWSDPSMGGWGGEEHGGGRAGESSYGEEAASDHQYGEVSHDRGGWQNPMKEKDRASERDWSGSSERRYRDEREPGYERDMPREKDVGPDHDWPERRHRDDRDIGRERERERDRERERSRDRDRDRDRERDRDRDRDRYREERDRYADHHRYRDREPEHDEEWDRGRSSRTHSKSRLSQDEEHRSRSRDADYGKRRRLTSE